- Chinese Year End Parties -

Yearly celebrate for everyone’s effort. Hope y’all keep having fun in bioinformatics!

- Lunch Gathering to Welcome Aboard -

Together, let us innovate and take our laboratory to new heights!

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Bio-IT-Station


HK Tsai Lab of Bioinformatics

Institute of Information Science, Academia Sinica

News

Chinese New Year End Party

We take a one-day trip to 象山, Taipei, and enjoy a pleasant lunch at Nola Kitchen. At the end of the Chinese New Year, we thank all of
Jan 17, 2022 1 min read

BITS Christmas Party

The season of festivities has come and we wish that all of us spend the best time with our family and friends. With Christmas, the new year is also around the corner and our wish for the upcoming year is that we can continue to grow in the same way and at the same pace.
Dec 6, 2021 1 min read

Welcome Our New Research Assistants

Under COVID-19 pandemic, we still have three research assistants joining our laboratory! Welcome Zong-Yan Liu (Thomas), Kai-Li Chang, Ru-Yin Jian! Let’s start dreaming big and making our dreams come true this year!
Zong-Yan Liu, Kai-Li Chang, Ru-Yin Jian
Aug 1, 2021 1 min read
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Projects

TFAS

A bioinformatics-based exploration on the promoter occupancy and alternative splicing in the human genome

LncRNA

Reveal the function of lncRNA on the transcriptional regulation and epigenetic regulation

Lab Members

Principal Investigator

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Huai-Kuang Tsai

Research Fellow/Professor

Evolutionary Algorithm, Bioinformatics, Regulatory Mechanism, Metagenomics, Computational Biology

Researchers

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Wong Jin Yung

Postdoctoral Researcher

Evolution, Genomics, Machine Learning, Biomechanics

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Kai-Li Chang

Research Assistant

Bioinformatics, Genomics, Cancer biology, Epigenomics, Machine Learning

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Ru-Yin Jian

Research Assistant

Machine Learning, Bioinformatics, Cancer

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Zong-Yan Liu (Thomas)

Research Assistant

Bioinformatics, Genomics, Gene Regulation, Machine Learning

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Jia-Hong Chen

Student

Transformer, Deep Learning, eccDNA

Grad Students

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Yu-Hsin Chen

Doctoral Student

Bioinformatics, Proteomics

Administration

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Po-Fen Lin

Visiting Scholars

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Jia-Hsin Huang

Assistant Professor

Insect Physiology, Bioinformatics, Genomics

Alumni

See all of the alumnis here

Recent Publications

Quickly discover relevant content by filtering publications.

Transgenic refractory Aedes aegypti lines are resistant to multiple serotypes of dengue virus.

The areas where dengue virus (DENV) is endemic have expanded rapidly, driven in part by the global spread of Aedes species, which act …
Wei-Liang Liu, Chia-Wei Hsu, Shih-Peng Chan, Pei-Shi Yen, Matthew P. Su, Jian-Chiuan Li, Hsing-Han Li, Lie Cheng, Cheng-Kang Tang, Shih-Hsun Ko, Huai-Kuang Tsai, Zing Tsung-Yeh Tsai, Omar S. Akbari, Anna-Bella Failloux, Chun-Hong Chen
DOI

NK cell receptor and ligand composition influences the clearance of SARS-CoV-2

To explore how the immune system controls clearance of SARS-CoV-2, we used a single-cell, mass cytometry–based proteomics platform to …
Wan-Chen Hsieh, En-Yu Lai, Yu-Ting Liu, Yi-Fu Wang, Yi-Shiuan Tzeng, Lu Cui, Yun-Ju Lai, Hsiang-Chi Huang, Jia-Hsin Huang, Hung-Chih Ni, Dong-Yan Tsai, Jian-Jong Liang, Chun-Che Liao, Ya-Ting Lu, Laurence Jiang, Ming-Tsan Liu, Jann-Tay Wang, Sui-Yuan Chang, Chung-Yu Chen, Hsing-Chen Tsai, Yao-Ming Chang, Gerlinde Wernig, Chia-Wei Li, Kuo-I Lin, Yi-Ling Lin, Huai-Kuang Tsai, Yen-Tsung Huang, Shih-Yu Chen
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Connecting MHC-I-binding motifs with HLA alleles via deep learning.

The selection of peptides presented by MHC molecules is crucial for antigen discovery. Previously, several predictors have shown …
Ko-Han Lee, Yu-Chuan Chang, Ting-Fu Chen, Hsueh-Fen Juan, Huai-Kuang Tsai, Chien-Yu Chen
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