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Bio-IT-Station


HK Tsai Lab of Bioinformatics

Institute of Information Science, Academia Sinica

News

A Brand New BITS!!

We migrated our website to hugo
May 21, 2020 1 min read

Chinese Year End Party

One-day Taipei Zoo tour and treasure-hunting game. had a very nice meal at Juicy Bun restaurant near NCCU. Wish everyone the best in the future year!
Jan 21, 2020 1 min read

BITS LAB Christmas Party

BITS LAB Christmas Party 2018/12/25 Part 1 : https://youtu.be/bAQyZ2YbxVo Part 2: https://youtu.be/wAJmXS-39P0 Part 3: https://youtu.be/7cqm5itUm4M Part 4: https://youtu.be/iR06qmLz7IM
Dec 30, 2018 1 min read
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Projects

TFAS

A bioinformatics-based exploration on the promoter occupancy and alternative splicing in the human genome

LncRNA

Reveal the function of lncRNA on the transcriptional regulation and epigenetic regulation

Lab Members

Principal Investigator

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Huai-Kuang Tsai

Research Fellow/Professor

Evolutionary Algorithm, Bioinformatics, Regulatory Mechanism, Metagenomics, Computational Biology

Researchers

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Cheng-Hung Tsai

Research Assistant

Bioinformatics, Genomics, Proteomics, Linux system

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Tzu-Chieh Lin

Research Assistant

Bioinformatics, Genomics, Genetics, Machine Learning

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Yu-Ting Liu

Research Assistant

Computer Vision, Deep Learning, Bioinformatics

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Yen-Ling Liu

Research Assistant

Bioinformatics, NGS Analysis

Grad Students

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Cheng-Kai Shiau

Doctoral Student

System biology, Comparative Genomics, Epigenetics, Computational Biology

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Yu-Hsin Chen

Doctoral Student

Bioinformatics, Proteomics

Administration

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Po-Fen Lin

Visiting Scholars

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Jia-Hsin Huang

Assistant Professor

Insect Physiology, Bioinformatics, Genomics

Alumni

See all of the alumnis here

Recent Publications

Quickly discover relevant content by filtering publications.

H3K4 methylation at active genes mitigates transcription-replication conflicts during replication stress.

Transcription-replication conflicts (TRCs) occur when intensive transcriptional activity compromises replication fork stability, …
Shin Yen Chong, Sam Cutler, Jing-Jer Lin, Cheng-Hung Tsai, Huai-Kuang Tsai, Sue Biggins, Toshio Tsukiyama, Yi-Chen Lo, Cheng-Fu Kao
DOI

Inferring the transcriptional regulatory mechanism of signal-dependent gene expression via an integrative computational approach

Eukaryotic transcription factors (TFs) coordinate different upstream signals to regulate the expression of their target genes. To …
Sufeng Chiang, Hisaaki Shinohara, Jia Hsin Huang, Huai Kuang Tsai, Mariko Okada
DOI

Setting boundaries for genome-wide heterochromatic DNA deletions through flanking inverted repeats in Tetrahymena thermophile

Nucleic Acids Research, gkz209, https://doi.org/10.1093/nar/gkz209The Authors wish to correct two errors in Figure 3 part I: The …
Chih-Yi Gabriela Lin, Ju-Lan Chao, Huai-Kuang Tsai, Douglas Chalker, Meng-Chao Yao
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